SRR6576389_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576389_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	146566
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	436	0.2974769046027046	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	253	0.17261847904698224	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	241	0.16443104130562342	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	209	0.14259787399533316	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	203	0.13850415512465375	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	195	0.13304586329708118	No Hit
CCAATGGATCCTCGTTAAAGGATTTAAAGTGGACTCATTCCAATTACAGG	187	0.1275875714695086	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	172	0.11735327429281006	No Hit
GATTTAAAGTGGACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTAT	160	0.10916583655145122	No Hit
AGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTC	154	0.1050721176807718	No Hit
GCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGC	151	0.10302525824543209	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	148	0.10097839881009238	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAAACGC	25	0.0052258247	56.403072	2
GTATAAG	25	0.0052258247	56.403072	1
TGCCCGC	35	2.928253E-4	53.71721	1
GCAAACG	45	1.6064698E-5	52.225063	1
GTATCAA	530	0.0	47.00256	1
AACGCAG	570	0.0	41.216248	6
ATCAACG	615	0.0	39.728443	3
CAACGCA	625	0.0	39.09279	5
TCAACGC	635	0.0	37.73721	4
AGCGTAG	25	0.0017023557	37.58922	36-37
ATAAGCC	50	0.001699579	37.58922	3
TATCAAC	650	0.0	36.87893	2
CCTAGTA	65	1.4070286E-4	36.15582	2
GTACTGT	80	1.1540409E-5	35.23989	6
ACGCAGA	670	0.0	35.064568	7
CGCAGAG	685	0.0	34.29673	8
GTACACT	55	0.0027131275	34.17202	4
GTATAAT	70	2.1750508E-4	33.573257	1
ATGGGGC	115	1.1286829E-7	32.68628	5
ACATGGG	965	0.0	32.62277	3