SRR6576387_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576387_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	243438
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	615	0.252631060064575	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	346	0.14213064517454135	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	330	0.13555812979074755	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	282	0.11584058363936608	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	282	0.11584058363936608	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	260	0.10680337498664959	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	252	0.10351711729475266	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	245	0.10064164181434287	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACACCGT	35	2.9369575E-4	53.699265	6
GTAATAC	50	0.0017017297	37.58948	3
CATGGGT	335	0.0	35.064816	4
GTATCAA	815	0.0	34.598656	1
ACATGGG	1470	0.0	34.52095	3
GTACATG	1500	0.0	33.837482	1
TACATGG	1515	0.0	33.50246	2
AACGCAG	840	0.0	31.883938	6
GGGCAAT	60	0.004156109	31.331003	1
CATGGGG	600	0.0	30.541454	4
TATAAGG	110	2.9575021E-6	29.906868	2
ATGGGTA	210	1.8189894E-12	29.087101	5
ATGGGGC	210	1.8189894E-12	29.087101	5
GGTACCT	210	1.8189894E-12	29.087101	8
TCAACGC	925	0.0	28.95406	4
ATCAACG	930	0.0	28.798395	3
CGCAGAG	940	0.0	28.49203	8
CAACGCA	945	0.0	28.341276	5
CTACACT	100	5.3166787E-5	28.192112	4
ACGCAGA	960	0.0	27.898445	7