SRR6576334_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576334_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	449713
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1260	0.28017869174340077	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	664	0.1476497232679509	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	660	0.14676026710368612	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	578	0.12852641573625845	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	570	0.12674750340772892	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	540	0.1200765821757432	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	490	0.10895838012243363	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	479	0.10651237567070554	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	459	0.10206509484938173	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1025	0.0	44.49168	1
GCGTAAG	25	0.0017020578	37.598976	64-65
ACATGGG	2420	0.0	35.346146	3
CATGGGT	700	0.0	34.913338	4
GTACATG	2500	0.0	34.6026	1
ATCAACG	1270	0.0	34.416386	3
TACATGG	2615	0.0	32.901093	2
CAACGCA	1335	0.0	32.740685	5
TCAACGC	1350	0.0	32.376896	4
ATGGGTA	510	0.0	32.254025	5
AACGCAG	1405	0.0	31.778494	6
GGTACCT	520	0.0	28.922289	8
CATGGGG	1095	0.0	28.327995	4
CTGTATA	85	6.8106747E-4	27.646305	4
ACGCAGA	1635	0.0	27.595581	7
CGCAGAG	1645	0.0	27.427826	8
ATACCTT	120	5.834052E-6	27.41592	6
GGTATCA	505	0.0	26.998371	1
GTAGCAC	90	9.51015E-4	26.110401	3
TATCAAC	1745	0.0	25.864658	2