SRR6576324_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576324_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	335106
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	824	0.2458923445118858	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	537	0.1602478021879644	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	482	0.14383508501787493	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	424	0.12652712872941696	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	381	0.11369536803280157	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	375	0.11190488979606454	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	372	0.11100965067769601	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	360	0.10742869420422195	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	352	0.10504138988857256	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1170	0.0	41.365032	1
TACATGG	2345	0.0	38.27124	2
ACTATCC	50	0.0017025365	37.58997	8
GTACATG	2405	0.0	37.511826	1
ACATGGG	2425	0.0	36.62116	3
ATGGGAT	335	0.0	35.065273	5
GTCCTAA	55	0.002717826	34.172703	1
CATGGGT	560	0.0	33.562477	4
ATCAACG	1450	0.0	32.7292	3
GGTACCT	345	0.0	32.68693	8
AACGCAG	1455	0.0	32.61673	6
TCAACGC	1465	0.0	32.39409	4
ATGGGTA	365	0.0	32.183197	5
CAACGCA	1495	0.0	31.744041	5
GGGTACC	365	0.0	30.895868	7
CATGGGA	1450	0.0	29.488686	4
GACTAAT	80	4.7812014E-4	29.367165	1
ACGCAGA	1645	0.0	28.849445	7
ATGGGAG	495	0.0	28.477253	5
CGCAGAG	1670	0.0	28.417568	8