SRR6576287_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576287_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	256637
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	549	0.21392082981019886	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	383	0.14923802881112233	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	356	0.13871733226307975	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	325	0.12663801400421607	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	314	0.122351804299458	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	291	0.11338972946223654	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	291	0.11338972946223654	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	281	0.10949317518518374	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	280	0.10910351975747846	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	277	0.10793455347436261	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	269	0.10481731005272038	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATTGA	45	0.0010036371	41.85231	1
GTATCAA	1040	0.0	38.029266	1
TTAGGGC	75	7.429602E-6	37.59369	4
GTATACT	75	7.429602E-6	37.59369	4
ACATGGG	1920	0.0	35.48883	3
GTACATG	1970	0.0	35.37264	1
TACATGG	1990	0.0	34.948906	2
GTATAGA	70	2.1575764E-4	33.631325	1
CATGGGT	380	0.0	33.38913	4
AACGCAG	1200	0.0	33.28608	6
ATGGGAG	330	0.0	32.75208	5
CAACGCA	1230	0.0	32.09217	5
TCAACGC	1235	0.0	31.962244	4
ATCAACG	1240	0.0	31.833363	3
CATGGGG	585	0.0	31.328074	4
ATGGGTA	240	0.0	31.328072	5
CGACAAT	30	0.004162275	31.328072	86-87
ACGCAGA	1385	0.0	28.83992	7
ATGGGGA	365	0.0	28.324009	5
CGCAGAG	1415	0.0	28.250494	8