SRR6576286_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576286_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	276855
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	508	0.1834895522927164	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	395	0.14267396290476966	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	383	0.13833956403171335	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	323	0.1166675696664319	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	300	0.10835997182640732	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	299	0.1079987719203193	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	299	0.1079987719203193	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	291	0.10510917267161511	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1110	0.0	39.48193	1
GTACATG	2040	0.0	37.883675	1
ACATGGG	2005	0.0	37.737385	3
CATGGGG	710	0.0	37.729134	4
GTACTAG	50	0.0016780029	37.698875	1
TGTACGA	25	0.0017004787	37.603542	74-75
TACATGG	2050	0.0	37.59675	2
AACGCAG	1280	0.0	33.044018	6
ATCAACG	1330	0.0	32.50847	3
CAACGCA	1355	0.0	31.90868	5
TCAACGC	1360	0.0	31.79137	4
ACCGAGG	60	0.004157336	31.330624	8
CATGGGA	1130	0.0	30.776102	4
GTACTAA	65	0.0060678287	28.999138	1
TATCAAC	1510	0.0	28.944517	2
CTAAAGC	65	0.0061488072	28.920578	3
CGCAGAG	1455	0.0	28.423658	8
GTATTAT	100	5.214926E-5	28.274158	1
ACGCAGA	1480	0.0	28.261068	7
ATGGGGA	410	0.0	27.509817	5