SRR6576279_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576279_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	306009
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	705	0.2303853808221327	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	437	0.14280625733230068	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	394	0.12875438304102166	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	356	0.11633644762082161	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	354	0.11568287207239002	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	339	0.11078105545915316	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	323	0.10555245107170051	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	315	0.10293814887797417	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	312	0.10195778555532681	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	940	0.0	43.12512	1
ATCAACG	1115	0.0	36.677174	3
AACGCAG	1135	0.0	36.445026	6
ACATGGG	2065	0.0	36.42096	3
TACATGG	2100	0.0	36.26162	2
GTACATG	2130	0.0	36.071793	1
TCAACGC	1140	0.0	35.872852	4
CAACGCA	1155	0.0	35.406967	5
ATGGGTA	350	0.0	34.918594	5
TTACGAG	55	0.0027122656	34.18604	2
CATGGGG	720	0.0	33.295776	4
ACGCAGA	1265	0.0	32.32282	7
CGCAGAG	1290	0.0	31.696407	8
ATGGGCG	60	0.0041537443	31.3372	5
CATGGGT	515	0.0	31.032957	4
GGGTACC	330	0.0	29.907894	7
TATCAAC	1440	0.0	29.052198	2
ATAGACG	65	0.0061484105	28.92192	8
GGTACCT	345	0.0	28.607552	8
ATACCGT	150	3.6747224E-8	28.20348	6