SRR6576278_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576278_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	222787
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	559	0.25091230637335216	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	319	0.14318609254579487	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	292	0.13106689349019468	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	278	0.12478286435025382	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	275	0.12343628667740936	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	274	0.12298742745312788	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	262	0.11760111676175002	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	262	0.11760111676175002	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	233	0.10458419925758683	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	231	0.10368648080902386	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTACTA	45	0.0010098041	41.79784	9
ATGGGAG	360	0.0	39.15909	5
TACATGG	1780	0.0	38.551758	2
GTACATG	1805	0.0	38.338448	1
ACATGGG	1800	0.0	37.070606	3
CATGGGA	990	0.0	35.124516	4
ATAGTGT	100	1.399143E-6	32.915802	8
ATGGGTA	200	0.0	32.893635	5
GGTACCT	175	5.456968E-12	32.24405	8
GGGTACC	175	5.456968E-12	32.222336	7
GTATCAA	780	0.0	31.383629	1
CATAGGA	75	3.2708433E-4	31.327272	4
TAGTACT	60	0.0041577844	31.32727	4
CATGGGT	355	0.0	30.444815	4
ACATAGG	65	0.006149475	28.917484	3
CATGGGG	600	0.0	28.194546	4
ATGGGAT	290	0.0	27.546394	5
ACGGCAA	35	0.0088096615	26.870043	92-93
CGAAAAT	35	0.008838654	26.851948	60-61
TGGGAGA	235	7.2759576E-12	25.99497	6