SRR6576278_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576278_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	222787
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	544	0.2441794180091298	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	309	0.13869750030297998	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	277	0.12433400512597234	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	271	0.12164084978028342	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	265	0.11894769443459448	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	258	0.11580567986462405	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	251	0.11266366529465363	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	245	0.1099705099489647	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	238	0.10682849537899429	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	227	0.1018910439118979	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTGACGC	25	0.0052366	56.383434	9
GTACATG	1830	0.0	40.071796	1
TACATGG	1860	0.0	38.928764	2
ACATGGG	1910	0.0	38.630833	3
ATGGGAG	370	0.0	36.835285	5
CATGGGC	335	0.0	33.66931	4
CATGGGA	985	0.0	33.3987	4
GTATCAA	850	0.0	33.18162	1
CATGGGG	675	0.0	32.02741	4
ATGGGAT	235	0.0	31.997784	5
ATGGGTA	200	0.0	30.547884	5
ATGGGGA	295	0.0	30.269089	5
CTATAGA	80	4.7643215E-4	29.37956	1
CATTAGA	65	0.0061322697	28.934063	2
ATGGGGG	260	0.0	28.921074	5
TAGACTG	65	0.0061457455	28.921074	5
GTTGCAC	65	0.0061457455	28.921074	3
CCTATTC	135	4.6092646E-7	27.849922	3
CGACGGT	85	6.8014767E-4	27.645144	7
CTAACCT	70	0.00882399	26.855282	4