SRR6576263_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576263_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	154894
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	360	0.23241700776014565	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	205	0.13234857386341625	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	201	0.12976616266608132	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	183	0.11814531227807402	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	177	0.11427169548207163	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	167	0.10781566748873422	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	167	0.10781566748873422	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGGGTA	50	2.9974066E-5	46.99968	5
CCGCGGA	25	3.0044179E-5	46.99968	74-75
CAGTACT	55	5.262078E-5	42.726974	4
GTATCAA	535	0.0	42.181553	1
GTATACA	50	0.0016948486	37.61189	1
CATGGGT	325	0.0	37.599743	4
TCCATTA	50	0.0016975409	37.599743	8
TACATGG	1060	0.0	37.25706	2
GTACATG	1065	0.0	37.08214	1
ACATGGG	1070	0.0	36.896942	3
ATGGGTT	65	1.4079074E-4	36.1536	5
TATTAGG	55	0.00270559	34.192623	2
AACGCAG	635	0.0	34.04701	6
TATAGCC	70	2.1722779E-4	33.582043	2
ATCAACG	630	0.0	33.5712	3
CAACGCA	645	0.0	33.51915	5
TCAACGC	645	0.0	33.51915	4
CATGGGA	470	0.0	31.999783	4
ATGGGTG	150	1.0550139E-9	31.333118	5
ATGGGAG	195	0.0	31.333118	5