SRR6576242_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576242_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	427590
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1079	0.2523445356533128	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	682	0.15949858509319675	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	552	0.129095628990388	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	512	0.11974087326644682	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	500	0.11693444654926448	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	484	0.11319254425968801	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	460	0.10757969082532332	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	457	0.10687808414602774	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1035	0.0	53.15114	1
TCAACGC	1395	0.0	39.416264	4
ATCAACG	1420	0.0	39.053276	3
AACGCAG	1430	0.0	38.451534	6
CAACGCA	1445	0.0	38.05238	5
GTACATG	2690	0.0	37.579697	1
ACATGGG	2730	0.0	37.011753	3
TACATGG	2720	0.0	36.82811	2
TATCAAC	1650	0.0	33.63309	2
GTCCTAA	70	2.177726E-4	33.58451	1
ATTAGAC	70	2.1837214E-4	33.568794	3
CATGGGT	640	0.0	33.044285	4
ACGCAGA	1670	0.0	32.92556	7
CGCAGAG	1750	0.0	31.420395	8
CGTTATT	125	2.344459E-7	30.098766	2
GCGTTAT	125	2.3492794E-7	30.09172	1
TACATCG	95	3.74883E-5	29.681883	5
CATGGGG	1375	0.0	29.39406	4
CATGGGA	1040	0.0	28.920809	4
ATGGGAG	525	0.0	28.64537	5