SRR6576184_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576184_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	480255
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1075	0.22383941864217968	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	774	0.16116438142236938	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	659	0.13721876919553155	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	642	0.13367898304025985	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	640	0.13326253761022788	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	583	0.12139384285431698	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	571	0.1188951702741252	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	538	0.11202382067859783	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	519	0.1080675890932942	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	483	0.10057157135271887	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	482	0.10036334863770288	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1310	0.0	44.221664	1
CGCGATT	25	0.001701055	37.60375	90-91
TCAACGC	1665	0.0	34.438286	4
AACGCAG	1680	0.0	34.40698	6
GCATTAG	55	0.002687881	34.253	1
ATCAACG	1695	0.0	33.82876	3
ACATGGG	2910	0.0	33.755863	3
CAACGCA	1705	0.0	33.626846	5
GTACATG	3010	0.0	33.328392	1
TACATGG	3080	0.0	32.5031	2
GTCTATA	75	3.2330366E-4	31.39858	1
ATTAGCC	60	0.0041586813	31.333195	3
TATACGT	60	0.0041608014	31.329933	5
ACGCAGA	1925	0.0	30.027908	7
GATCTAA	65	0.0060884478	28.983305	1
TATCAAC	2040	0.0	28.798891	2
CGCAGAG	2035	0.0	28.635714	8
CATGGGT	825	0.0	28.484724	4
CATTAGC	85	6.8104453E-4	27.646936	2
CATGGGG	1405	0.0	27.095966	4