SRR6576180_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576180_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	269832
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	515	0.19085949776157018	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	428	0.15861721367369325	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	352	0.1304515402176169	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	312	0.11562750155652406	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	312	0.11562750155652406	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	309	0.1145156986569421	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	288	0.10673307835986835	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	274	0.10154466482848587	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	940	0.0	41.53899	1
TACATGG	2115	0.0	38.43778	2
GTACATG	2145	0.0	37.723053	1
ACATGGG	2145	0.0	37.023876	3
CATGGGT	605	0.0	34.175888	4
AACGCAG	1140	0.0	33.388943	6
GTGTAAG	85	1.7386175E-5	33.207638	1
ATGGGAC	215	0.0	32.785007	5
ATCAACG	1180	0.0	32.257114	3
TCAACGC	1190	0.0	31.986048	4
CAACGCA	1210	0.0	31.457354	5
GTCTAGT	60	0.0041363295	31.36277	1
GTACTAG	60	0.0041363295	31.36277	1
GGTTAGC	60	0.004143849	31.351137	8
ATGGGTG	300	0.0	29.761503	5
TATCAAC	1370	0.0	29.498531	2
ACGCAGA	1290	0.0	29.142231	7
CATGGGA	1135	0.0	28.981756	4
TGCACCG	65	0.0061511504	28.918058	5
ATGGGAG	440	0.0	28.835905	5