SRR6576149_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576149_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	649041
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	1977	0.30460325310727676	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1467	0.22602578265471673	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1458	0.22463912141143624	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1442	0.22217394586782654	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	957	0.14744831220215673	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	895	0.13789575697066903	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	845	0.13019208339688865	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	752	0.11586325054965711	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	749	0.11540103013523029	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	737	0.113552148477523	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	654	0.10076405034504753	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1860	0.0	37.396442	1
ACATACG	65	1.4150474E-4	36.14413	8
TACATGG	3845	0.0	34.347206	2
GTACATG	3935	0.0	33.681065	1
ACATGGG	3955	0.0	32.908978	3
TAGGTAT	415	0.0	32.834545	5
AACGCAG	2220	0.0	31.74822	6
CTTAGGT	420	0.0	31.32491	3
TCAACGC	2260	0.0	30.56258	4
GGTATAG	450	0.0	30.280746	7
CAACGCA	2300	0.0	30.031055	5
ATCAACG	2300	0.0	30.031055	3
TCTTAGG	585	0.0	28.921986	2
GTCTTAG	490	0.0	28.774426	1
CATGGGG	1990	0.0	28.570206	4
GTATAGT	580	0.0	28.354445	8
TGGGTAC	570	0.0	28.02755	6
TTAGGTA	470	0.0	27.992476	4
AGGTATA	490	0.0	27.808847	6
GGGTACC	565	0.0	27.443949	7