SRR6576147_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576147_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	344127
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	899	0.2612407628578984	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	451	0.13105626701769987	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	442	0.12844095348519588	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	393	0.11420202425267416	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	384	0.11158671072017017	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	371	0.1078090356176644	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	370	0.10751844522516396	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	354	0.10286899894515689	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGAACT	50	2.9874112E-5	47.04669	1
CTAGTAC	60	8.812481E-5	39.1657	3
GTATCAA	905	0.0	38.988968	1
CGAACTC	55	0.0027108383	34.19091	2
TACATGG	1775	0.0	33.10739	2
GGGTACC	330	0.0	32.756767	7
GTACATG	1810	0.0	32.490807	1
ACATGGG	1825	0.0	31.933456	3
TCAACGC	1080	0.0	31.767735	4
TGGGTAC	370	0.0	31.755972	6
CAACGCA	1085	0.0	31.621338	5
AACGCAG	1105	0.0	31.474337	6
ATGGGTA	345	0.0	31.332558	5
GGTACCT	345	0.0	31.332558	8
ATCAACG	1100	0.0	31.190138	3
GTACTAG	65	0.0061184983	28.95181	1
CATGGGT	490	0.0	28.7748	4
TAGGGTG	115	4.1859766E-6	28.607988	5
CTAAATA	100	5.313746E-5	28.199305	4
CATGGGG	945	0.0	27.35382	4