SRR6576140_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576140_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1098321
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2118	0.19283979820107236	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2054	0.1870127221458936	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1954	0.17790791580967677	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1513	0.13775571986696056	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1313	0.11954610719452693	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1240	0.11289959856908864	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1230	0.11198911793546695	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1184	0.10780090702080722	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1169	0.10643518607037468	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	670	60.332275	1
GTATCAA	1920	55.816124	1
TCAACGC	2455	41.724644	4
ATCAACG	2475	41.387474	3
CAACGCA	2595	39.65467	5
AACGCAG	2700	38.11255	6
GTCTTAG	740	34.9347	1
CTTAGGT	570	32.974083	3
TATCAAC	3230	31.870394	2
ACGCAGA	3355	30.671797	7
GTACATG	4565	30.37437	1
TTAGGTA	595	30.00919	4
AGGTATA	595	30.00919	6
TACATGG	4615	29.639242	2
ACCTAAG	765	29.49211	1
TAGGTAT	630	29.087852	5
CGCAGAG	3620	28.426485	8
ACATGGG	4845	28.124954	3
TCTTAGG	865	27.714045	2
GGTATAG	675	26.452545	7