SRR6576139_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576139_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1217141
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2399	0.19710123970846433	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2215	0.1819838457499994	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1836	0.15084530058555254	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1357	0.11149078044367909	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1277	0.1049180004617378	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1256	0.1031926457164782	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1253	0.1029461664671554	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1253	0.1029461664671554	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1252	0.10286400671738113	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1232	0.10122081172189581	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	725	62.376713	1
GTATCAA	2320	57.259872	1
ATCAACG	3015	43.497005	3
TCAACGC	3035	43.21037	4
CAACGCA	3120	42.334476	5
AACGCAG	3195	41.34071	6
TATCAAC	3610	37.109074	2
ACGCAGA	3870	33.881634	7
TAGGTAT	655	32.293392	5
CTTAGGT	665	31.100939	3
AGGTATA	640	30.846918	6
CGCAGAG	4270	30.707712	8
GTCTTAG	855	29.752052	1
GCAGAGT	4540	28.674444	9
TTAGGTA	745	28.39218	4
GTACATG	4940	27.749508	1
GGTATAG	745	26.495012	7
TACATGG	5255	26.029314	2
TCTTAGG	1015	25.470594	2
ACATGGG	5275	25.395973	3