SRR6576128_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576128_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1175344
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1725	0.1467655426836739	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1478	0.12575041860085218	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1304	0.11094624212145551	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1273	0.10830871642685035	No Hit
GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT	1260	0.10720265726459659	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1259	0.10711757579057707	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	1258	0.10703249431655752	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1226	0.10430988714793286	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1220	0.10379939830381572	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1188	0.10107679113519107	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	1180	0.10039613934303489	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2315	60.1014	1
GGTATCA	755	57.27759	1
ATCAACG	3050	45.303936	3
TCAACGC	3105	44.652817	4
AACGCAG	3170	43.73722	6
CAACGCA	3190	43.610336	5
TATCAAC	3720	37.40181	2
ACGCAGA	3925	35.20433	7
CGCAGAG	4175	33.096287	8
GCAGAGT	4365	31.763344	9
TAGGTAT	320	30.843079	5
GTACATG	5245	30.559956	1
TACATGG	5370	29.498468	2
ACATGGG	5450	28.97552	3
CTTAGGT	335	28.059092	3
AGGTATA	340	27.646461	6
TTAGGTA	370	25.404852	4
CATGGGA	2410	25.15713	4
AGAGTAC	4025	24.75474	10-11
TCTTAGG	665	24.03262	2