SRR6576122_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576122_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1464823
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3014	0.20575864797316806	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2531	0.17278538089584883	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2229	0.15216855551831177	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	2050	0.13994864908593052	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1766	0.1205606411150016	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1693	0.11557710385486847	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1679	0.11462135698306211	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1678	0.11455308934936166	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1556	0.10622443803790628	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1468	0.10021688627226634	No Hit
GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT	1466	0.10008035100486544	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2590	61.618603	1
GGTATCA	855	51.757538	1
ATCAACG	3495	44.23734	3
TCAACGC	3490	44.166065	4
CAACGCA	3610	42.567764	5
AACGCAG	3735	41.01872	6
TATCAAC	4335	36.20866	2
ACGCAGA	4815	31.719574	7
CGCAGAG	5005	30.63024	8
CTTAGGT	640	30.105383	3
AGGTATA	625	30.077042	6
GTCTTAG	810	29.641287	1
GTACATG	6145	28.882273	1
TTAGGTA	645	28.414837	4
GCAGAGT	5470	28.112362	9
TACATGG	6245	27.843536	2
GGTATAG	685	27.441616	7
TAGGTAT	690	27.242765	5
ACATGGG	6305	27.05589	3
ACCTAAG	965	26.831644	1