SRR6576107_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576107_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1026413
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3510	0.3419676095294974	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3205	0.3122524753681023	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2791	0.2719178342441103	No Hit
ACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTT	1412	0.13756645716685192	No Hit
GTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACG	1352	0.13172085700395456	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1239	0.12071164336383113	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1175	0.11447633652340725	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1166	0.11359949649897264	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGTTGCTGCTGTGTTTGGGACT	1062	0.10346712288328383	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	635	0.0	55.509678	1
GTATCAA	1855	0.0	54.725666	1
TATAGCG	40	5.6843297E-4	46.986748	5
TCAACGC	2265	0.0	44.603283	4
ATCAACG	2315	0.0	43.43695	3
CAACGCA	2365	0.0	42.913902	5
AACGCAG	2440	0.0	41.979965	6
TTAGGTA	965	0.0	38.954643	4
TAGGTAT	1000	0.0	38.059265	5
CTTAGGT	965	0.0	37.980778	3
AGGTATA	990	0.0	37.96909	6
GTCTTAG	1030	0.0	37.872334	1
GGTATAG	1045	0.0	36.420353	7
TATCAAC	2780	0.0	36.347527	2
TCTTAGG	1065	0.0	35.745106	2
TATAGTA	1100	0.0	34.599335	9
ACGCAGA	3010	0.0	34.03027	7
GTATAGT	1145	0.0	33.6499	8
CGCAGAG	3305	0.0	30.850605	8
GTACATG	4070	0.0	30.600792	1