SRR6576076_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576076_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1309694
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1646	0.12567821185712083	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1521	0.11613399771244276	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1462	0.1116291286361547	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1440	0.10994934694669137	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1430	0.10918580981511712	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1336	0.1020085607783192	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	1317	0.10055784022832814	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1317	0.10055784022832814	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2175	0.0	60.17376	1
GGTATCA	745	0.0	58.769	1
TCAACGC	2940	0.0	44.274883	4
ATCAACG	2980	0.0	43.68059	3
CAACGCA	3060	0.0	42.692184	5
AACGCAG	3145	0.0	41.53834	6
ACGCAGA	3775	0.0	34.606113	7
TATCAAC	3875	0.0	34.19813	2
CGCAGAG	3955	0.0	32.934937	8
TACATGG	5305	0.0	29.674568	2
GTACATG	5300	0.0	29.579441	1
ACATGGG	5410	0.0	29.272354	3
GCAGAGT	4470	0.0	29.140419	9
GCGTAGT	85	6.750511E-4	27.69317	1
CTAAGAC	565	0.0	25.783287	3
TAAGACA	625	0.0	25.563711	4
ATAGGGT	210	1.4333636E-9	24.614916	3
AGAGTAC	3935	0.0	24.318861	10-11
TATAAGC	215	1.882654E-9	24.042477	2
ACCTAAG	335	0.0	23.890526	1