SRR6576046_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576046_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1690009
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2793	0.16526539207779367	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	2351	0.1391116852040433	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	2216	0.13112356206387066	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	2150	0.12721825741756407	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	2141	0.1266857158748859	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	2106	0.12461472098669298	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	2062	0.1220111845558219	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2034	0.12035438864526757	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	2018	0.11940764812495082	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	2008	0.11881593529975285	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	1984	0.1173958245192777	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1925	0.11390471885060968	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1920	0.11360886243801067	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1887	0.1116562101148574	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	3095	61.39821	1
GGTATCA	995	56.394295	1
ATCAACG	4000	45.94362	3
TCAACGC	4020	45.831955	4
CAACGCA	4160	44.514183	5
AACGCAG	4300	42.955585	6
TATCAAC	4965	37.392647	2
GTCTTAG	930	35.491665	1
CTTAGGT	750	35.094185	3
ACCTAAG	1085	34.767345	1
ACGCAGA	5275	34.657482	7
TAGGTAT	730	33.47927	5
CGCAGAG	5485	33.330574	8
AGGTATA	710	33.098415	6
TTAGGTA	750	31.960775	4
GCAGAGT	5865	31.411444	9
GGTATAG	790	29.744915	7
GTACATG	7320	29.05205	1
TACATGG	7380	28.27711	2
ACATGGG	7330	27.8929	3