SRR6576017_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576017_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1963306
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2601	0.13248062197130758	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	2372	0.120816622574372	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	2247	0.11444981067648141	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	2225	0.11332925178245266	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	2206	0.1123614963739733	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	2203	0.1122086928884239	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	2117	0.10782832630267518	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	2089	0.10640216043754769	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	2054	0.10461945310613831	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	2052	0.10451758411577207	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2965	62.304794	1
GGTATCA	1020	48.84941	1
ATCAACG	4175	43.79055	3
CAACGCA	4230	43.665604	5
TCAACGC	4190	43.63378	4
AACGCAG	4445	41.765015	6
TATCAAC	5035	36.969994	2
ACGCAGA	5450	33.977154	7
GTACATG	8025	32.3917	1
TACATGG	8080	32.05486	2
CGCAGAG	6005	30.836884	8
ACATGGG	8440	30.515844	3
ACCTAAG	945	29.845104	1
TAGGTAT	705	27.999317	5
GCAGAGT	6675	27.671236	9
TTAGGTA	695	27.049702	4
AGAGTAC	5490	25.768044	10-11
GTCTTAG	1025	25.681345	1
AGGTATA	660	25.635738	6
TAAGACA	1395	25.605112	4