SRR6576009_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576009_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1360600
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2983	0.21924151109804496	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2234	0.1641922681170072	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2089	0.15353520505659268	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1883	0.13839482581214171	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1509	0.1109069528149346	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1502	0.11039247390856974	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1495	0.10987799500220491	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1467	0.10782007937674555	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1378	0.10127884756724974	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1367	0.10047038071439071	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2065	59.511047	1
GGTATCA	705	52.761257	1
TCAACGC	2760	43.078228	4
ATCAACG	2785	43.029015	3
CAACGCA	2905	40.928024	5
AACGCAG	3025	39.304432	6
ACCTAAG	980	35.553535	1
TATCAAC	3520	34.58083	2
TAGGTAT	715	33.520504	5
GTCTTAG	965	31.71489	1
AGGTATA	715	31.54871	6
TTAGGTA	750	31.32962	4
ACGCAGA	3845	31.044437	7
CTAAGAC	1310	30.851307	3
CTTAGGT	740	30.482876	3
CGCAGAG	3965	30.123703	8
TAAGACA	1360	29.371521	4
GTACATG	5430	29.048397	1
CCTAAGA	1330	28.97614	2
GGTATAG	770	28.684914	7