SRR6576008_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576008_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1532048
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3111	0.2030615228765678	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2363	0.15423798732154606	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2217	0.14470825979342683	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1820	0.11879523356970538	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1661	0.10841696865894541	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1592	0.10391319332031372	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1564	0.10208557434231826	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1560	0.10182448591689033	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1537	0.10032322747067976	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	890	55.633724	1
GTATCAA	2310	55.32178	1
TCAACGC	3185	39.84365	4
ATCAACG	3225	39.05799	3
CAACGCA	3290	38.143467	5
AACGCAG	3405	37.131283	6
TATCAAC	3900	32.418465	2
TAGGACA	445	31.685898	4
AGGTATA	630	30.587791	6
CTTAGGT	615	30.569593	3
GTACATG	6190	30.167782	1
TACATGG	6290	29.366129	2
ACGCAGA	4380	28.863873	7
ACATGGG	6260	28.831133	3
TAGGTAT	670	28.06015	5
CGCAGAG	4540	27.743126	8
GTCTTAG	870	27.101267	1
TTAGGTA	725	25.931448	4
ACCTAAG	1055	25.924738	1
GGTATAG	750	25.692068	7