SRR6576007_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576007_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1216413
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2520	0.20716648046346103	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2178	0.17905102954341987	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1781	0.14641408797834288	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1513	0.12438209719889545	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1304	0.10720043274775919	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1260	0.10358324023173052	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1231	0.10119918152798432	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	830	60.664463	1
GTATCAA	2120	57.0461	1
TCAACGC	2770	43.600605	4
ATCAACG	2765	43.33953	3
CAACGCA	2835	42.43518	5
AACGCAG	2990	40.078197	6
GTCTTAG	900	35.03168	1
TATCAAC	3520	34.178604	2
TAGGTAT	625	33.83543	5
ACGCAGA	3595	33.333466	7
CTTAGGT	655	32.285713	3
AGGTATA	660	31.329098	6
ACCTAAG	940	30.5373	1
GTACATG	4795	30.42298	1
TCTTAGG	835	30.392351	2
CGCAGAG	4015	30.099176	8
GGTATAG	725	29.168472	7
TACATGG	5090	28.622063	2
CTAAGAC	1125	28.40505	3
ACATGGG	5080	28.21469	3