SRR6575972_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575972_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1125063
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1569	0.1394588569706763	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1562	0.13883666959094734	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1434	0.12745952893304643	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1405	0.12488189550274073	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1352	0.12017104819907862	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1313	0.11670457565487445	No Hit
GTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCA	1303	0.11581573654097592	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	1239	0.11012716621202547	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	1228	0.1091494431867371	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1485	62.6712	1
GGTATCA	440	57.68599	1
TCAACGC	2310	40.274303	4
CAACGCA	2365	39.337692	5
ATCAACG	2365	39.337692	3
AACGCAG	2490	37.740314	6
TACATGG	4425	30.80449	2
GTACATG	4480	30.741064	1
TATCAAC	3110	30.227268	2
ACATGGG	4545	29.67036	3
ACGCAGA	3170	29.644596	7
GGTACCT	750	28.818504	8
CGCAGAG	3315	28.20619	8
CTAAGAC	465	26.272125	3
GGGTACC	825	26.198639	7
ATGGGTA	935	26.131634	5
ACCTAAG	270	26.113	1
GCAGAGT	3800	24.606188	9
AGAGTAC	3285	24.387308	10-11
CATGGGG	2635	23.89456	4