SRR6575941_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575941_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	744135
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2792	0.3752007364255142	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1416	0.19028805257110604	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1186	0.15937968245009307	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	989	0.13290599152035584	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	935	0.12564924375281367	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	908	0.12202086986904258	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	907	0.12188648565112513	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	854	0.1147641221015004	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	844	0.11342027992232591	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	768	0.1032070793605999	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2320	0.0	61.895485	1
GGTATCA	730	0.0	47.081158	1
ATCAACG	3235	0.0	43.581825	3
CAACGCA	3275	0.0	43.049526	5
TCAACGC	3390	0.0	41.727776	4
AACGCAG	3450	0.0	41.410732	6
TATCAAC	3530	0.0	40.60811	2
GTACTAG	175	0.0	40.355278	1
ACGCAGA	3985	0.0	35.377098	7
CGCAGAG	4015	0.0	35.134007	8
GGTAATC	295	0.0	35.066517	8
GCAGAGT	4300	0.0	32.914707	9
AAGGGTA	305	0.0	32.357716	5
ACCTAAG	955	0.0	29.579784	1
GTGCAAG	340	0.0	29.079536	1
TGTCGAC	65	0.006157543	28.918509	7
GTACATG	4565	0.0	28.568415	1
TAGGCAT	315	0.0	28.34663	5
AGGTATA	455	0.0	27.887579	6
TACATGG	4625	0.0	27.843666	2