SRR6575934_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575934_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1021493
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4242	0.4152745050626876	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	3048	0.29838677308606126	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2800	0.27410858419979384	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1389	0.13597743694768344	No Hit
GTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACG	1324	0.1296142019573311	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1295	0.12677522019240464	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGCTGTGTTTGGG	1224	0.1198246096644813	No Hit
ACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTT	1173	0.11483191759512792	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1107	0.10837078668184706	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	1043	0.10210544761442321	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	1031	0.10093069653928123	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	3045	0.0	44.952686	1
GTACTAG	80	1.15210405E-5	35.27859	1
TCAACGC	3910	0.0	34.255886	4
ATCAACG	3945	0.0	34.0711	3
CAACGCA	3935	0.0	33.91882	5
TAGGTAT	735	0.0	33.249348	5
AACGCAG	4065	0.0	32.94647	6
AGGTATA	780	0.0	31.930511	6
GTCTTAG	850	0.0	31.543211	1
CTTAGGT	775	0.0	31.53325	3
TGTCGCG	60	0.004148266	31.352602	94
TATCAAC	4400	0.0	30.868269	2
GTACATG	6720	0.0	29.958803	1
GGTATAG	820	0.0	29.79985	7
TACATGG	7060	0.0	28.357765	2
ACATGGG	6940	0.0	28.170914	3
TTAGGTA	890	0.0	27.458729	4
ACGCAGA	4885	0.0	27.31985	7
ACCTAAG	1350	0.0	27.177582	1
TCTTAGG	1005	0.0	27.12246	2