SRR6575918_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575918_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1512739
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3611	0.23870608214635836	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2802	0.18522692943065525	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2740	0.18112840351177567	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1947	0.1287069349041705	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1919	0.1268559877149991	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1751	0.1157503045799705	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1730	0.11436209418809193	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1715	0.1133705153367501	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1697	0.11218062071513989	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1673	0.11059409455299295	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2355	52.594894	1
TCAACGC	2965	40.73227	4
ATCAACG	2980	40.684937	3
CAACGCA	3055	39.686123	5
AACGCAG	3240	37.565136	6
GGTATCA	940	37.075123	1
GTCTTAG	990	33.299793	1
GTACATG	6215	31.750578	1
CTTAGGT	905	31.155365	3
TACATGG	6315	30.882986	2
ACGCAGA	3925	30.769726	7
TTAGGTA	910	30.467781	4
TATCAAC	4000	30.193796	2
ACATGGG	6410	30.131031	3
TAGGTAT	915	29.274128	5
AGGTATA	940	28.49556	6
CGCAGAG	4395	27.498308	8
GGTATAG	1005	26.652563	7
ACCTAAG	1245	26.101078	1
TCTTAGG	1245	25.66753	2