SRR6575918_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575918_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1512739
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3417	0.22588166233567059	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3003	0.19851408603863588	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2709	0.17907914055233587	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1991	0.1316155662014399	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1954	0.12916967170146337	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1887	0.12474061949880318	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1822	0.1204437778096552	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1815	0.11998104101236234	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1730	0.11436209418809193	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1698	0.11224672597189601	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1656	0.10947030518813888	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1539	0.10173599014767253	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2665	46.566322	1
GGTATCA	1105	38.711887	1
TCAACGC	3155	38.423676	4
ATCAACG	3145	38.247047	3
CAACGCA	3295	36.93371	5
AACGCAG	3455	35.22332	6
TTAGGTA	885	35.04122	4
CTTAGGT	890	34.316418	3
AGGTATA	900	33.413044	6
TAGGTAT	915	33.378807	5
GTCTTAG	1055	32.97194	1
GGTATAG	935	32.16229	7
GTACATG	6285	29.91713	1
TATCAAC	4100	29.694849	2
GTATAGG	240	29.379559	1
TCTTAGG	1220	29.283232	2
ACCTAAG	1035	29.06731	1
TATAGTA	1075	28.84789	9
TACATGG	6530	28.794664	2
GTATAGT	1090	28.4509	8