SRR6575912_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575912_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1698265
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2371	0.13961307569784456	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2228	0.13119271727321707	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	2225	0.13101606639717595	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	2197	0.12936732488745867	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2188	0.12883737225933525	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	2095	0.12336119510206005	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	2044	0.12035813020936073	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	2033	0.11971041033054323	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1908	0.11234995716216255	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1770	0.1042240168642703	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1756	0.10339964610941166	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2630	52.193874	1
GGTATCA	955	43.81058	1
TCAACGC	3255	40.861355	4
ATCAACG	3360	39.72431	3
CAACGCA	3415	38.946915	5
AACGCAG	3570	37.519234	6
ACCTAAG	955	33.965508	1
TATCAAC	4300	31.3766	2
GTACATG	6885	30.452526	1
TACATGG	6935	29.961823	2
TAGGTAT	785	29.934889	5
AGGTATA	780	29.524244	6
ACATGGG	7160	29.209513	3
TTAGGTA	840	29.093863	4
TAAGACA	1455	29.070791	4
CTAAGAC	1375	29.053171	3
ACGCAGA	4595	29.047594	7
GTATAGA	260	28.929373	1
GTCTTAG	1080	28.728476	1
CTTAGGT	790	27.960703	3