SRR6575911_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575911_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1662126
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	2295	0.1380761747304356	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	2135	0.12844994904116774	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1986	0.11948552636803708	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1970	0.1185229037991103	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1934	0.11635700301902503	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1914	0.11515372480786655	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1850	0.11130323453215941	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	1843	0.11088208715825394	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1804	0.10853569464649492	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1775	0.1067909412403151	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	1668	0.10035340281061725	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2430	54.82022	1
TCAACGC	3065	42.010853	4
ATCAACG	3045	41.978127	3
CAACGCA	3135	41.072815	5
AACGCAG	3300	39.019173	6
GGTATCA	935	36.247787	1
TATCAAC	4060	32.295776	2
TTAGGTA	580	31.59934	4
GTACATG	6215	31.052986	1
AGGTATA	550	30.759642	6
CTTAGGT	585	30.525946	3
ACGCAGA	4210	30.250227	7
TACATGG	6360	30.00105	2
TAGGTAT	590	29.470749	5
ACATGGG	6530	29.074324	3
GTCTTAG	770	28.732124	1
CGCAGAG	4615	27.919514	8
GCAGAGT	5070	25.69217	9
GGTATAG	685	24.69752	7
ACCTAAG	735	24.33643	1