SRR6575902_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575902_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1306138
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3625	0.27753575808988024	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	3391	0.2596203463952507	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2933	0.22455513889037762	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1680	0.12862346857682724	No Hit
GTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACG	1429	0.10940650987874177	No Hit
ACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTT	1411	0.10802840128684718	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1380	0.10565499204525095	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1376	0.1053487456914966	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1362	0.1042768834533564	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1333	0.10205659738863734	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1320	0.10106129673893569	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2325	46.586605	1
TCAACGC	2865	37.234196	4
TAGGTAT	900	36.552143	5
ATCAACG	2935	36.50627	3
CAACGCA	2945	36.224125	5
AGGTATA	920	35.24671	6
AACGCAG	3090	35.13264	6
TTAGGTA	960	34.755844	4
GTCTTAG	1080	34.0116	1
CTTAGGT	1020	33.632828	3
GTATAGT	1040	32.10567	8
GGTATAG	1045	31.479109	7
GGTATCA	975	30.912317	1
TATAGTA	1085	30.774101	9
TCTTAGG	1305	29.889933	2
TATCAAC	3650	29.871185	2
GTACATG	5715	29.664871	1
TACATGG	5840	29.130844	2
GGTAATC	285	28.051805	8
ACGCAGA	3880	27.978275	7