SRR6575890_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575890_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1765813
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	3395	0.19226271411525456	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3331	0.18863832127184477	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2835	0.16054927673541877	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	2221	0.12577775789395593	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	2204	0.12481502854492521	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	2195	0.1243053483013207	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	2091	0.11841570993077975	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	2061	0.11671677578543142	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	2035	0.11524436619279618	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1962	0.11111029310578185	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1895	0.10731600684783724	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2965	46.76879	1
TCAACGC	3625	37.987843	4
ATCAACG	3715	36.941036	3
CAACGCA	3780	36.43014	5
TAGGTAT	1000	35.248962	5
AACGCAG	3945	35.02558	6
GGTATCA	1315	34.316605	1
AGGTATA	1080	32.637924	6
TTAGGTA	1125	32.167942	4
CTTAGGT	1130	32.0256	3
GTCTTAG	1235	31.9721	1
TATCAAC	4680	29.328903	2
TCTTAGG	1475	29.319368	2
GTACATG	7215	28.992289	1
GGTATAG	1245	28.689915	7
TACATGG	7280	28.53972	2
GTATAGT	1255	28.461313	8
ACGCAGA	5015	27.64624	7
TATAGTA	1310	27.26637	9
ACATGGG	7490	27.107344	3