SRR6575885_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575885_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	443350
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	590	0.13307770384572007	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	569	0.12834103981053344	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	557	0.12563437464756963	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	554	0.12495770835682868	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	532	0.11999548889139505	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	501	0.11300327055373859	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	497	0.11210104883275064	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	474	0.10691327393707002	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	555	0.0	53.337017	1
ATAGACC	70	4.6373516E-6	40.274887	3
ATCAACG	745	0.0	38.47288	3
TCAACGC	790	0.0	37.470936	4
CAACGCA	780	0.0	37.348934	5
AACGCAG	850	0.0	34.82593	6
GTACATG	1580	0.0	31.523169	1
ACGCAAC	75	3.277483E-4	31.324913	6
GTCTTAA	155	1.5188562E-9	30.314432	1
TACATGG	1650	0.0	30.185825	2
ACATGGG	1720	0.0	29.503696	3
CAACCGA	80	4.783723E-4	29.367105	9
TAGGCTG	80	4.783723E-4	29.367105	5
TATCAAC	1010	0.0	28.378511	2
TTAGGTA	150	3.696732E-8	28.192421	4
GTCTTAG	235	0.0	27.992476	1
TACGCAA	85	6.8201456E-4	27.63963	5
TAGTGAG	120	5.844775E-6	27.409298	5
CTAAGAC	310	0.0	27.282988	3
ACGCAGA	1055	0.0	27.16805	7