SRR6575858_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575858_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1561662
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2256	0.14446147757965552	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1940	0.12422662522363995	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1858	0.11897580910593969	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1820	0.11654250407578592	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1773	0.11353288995954311	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1765	0.11302061521635284	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1708	0.10937065767112218	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1651	0.10572070012589152	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1622	0.1038637041818268	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1568	0.1004058496652925	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1925	0.0	54.77372	1
ATCAACG	2595	0.0	38.935547	3
TCAACGC	2610	0.0	38.531727	4
CAACGCA	2675	0.0	37.595444	5
GGTATCA	705	0.0	37.389862	1
AACGCAG	2865	0.0	35.1022	6
ACCTAAG	765	0.0	30.765469	1
GTACATG	5550	0.0	30.363024	1
TACATGG	5555	0.0	30.286156	2
TAGGTAT	630	0.0	29.837652	5
GTACTAA	65	0.0061095045	28.966873	1
GTCTTAG	885	0.0	28.72139	1
ACATGGG	5815	0.0	28.60874	3
TATCAAC	3695	0.0	28.361917	2
ACGCAGA	3560	0.0	28.116476	7
AGGTATA	635	0.0	27.382507	6
TAAGACA	1185	0.0	27.36377	4
CTAAGAC	1145	0.0	25.857128	3
TTAGGTA	675	0.0	25.759838	4
CTTAGGT	700	0.0	25.51119	3