SRR6575857_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575857_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1734373
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2279	0.13140195332837862	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1969	0.11352805884316695	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1944	0.11208661573952085	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1889	0.10891544091149942	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1844	0.10632084332493645	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1820	0.10493705794543619	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1743	0.1004974131862062	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1738	0.10020912456547698	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2380	53.679127	1
ATCAACG	3170	39.292355	3
TCAACGC	3175	39.230476	4
CAACGCA	3355	37.26581	5
GGTATCA	1045	36.54112	1
AACGCAG	3540	35.58385	6
TTAGGTA	595	33.178272	4
TAGGTAT	595	32.388313	5
AGGTATA	585	31.335033	6
GTACATG	6610	30.810263	1
TACATGG	6605	30.528532	2
GTCTTAG	960	29.955164	1
ACATGGG	6720	29.93615	3
TATCAAC	4255	29.93582	2
CTTAGGT	675	29.246033	3
ACGCAGA	4350	28.954554	7
GGTATAG	660	27.77103	7
CGCAGAG	4785	26.518759	8
GTATAGT	760	24.735332	8
GGTACCT	1110	24.55706	8