SRR6575857_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575857_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1734373
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2077	0.11975509305091811	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1958	0.11289382387756268	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1934	0.11151003849806242	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1933	0.11145238077391657	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1863	0.10741634008370748	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1863	0.10741634008370748	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1841	0.10614787015249892	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1796	0.10355327256593592	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1786	0.1029766953244775	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2420	0.0	53.226482	1
TCAACGC	3140	0.0	40.262665	4
ATCAACG	3175	0.0	39.81882	3
CAACGCA	3335	0.0	38.0494	5
AACGCAG	3465	0.0	36.757496	6
GGTATCA	1000	0.0	33.84738	1
TATCAAC	4220	0.0	30.411844	2
TAGGTAT	670	0.0	28.760004	5
GTACATG	6495	0.0	28.734518	1
GTCTTAG	860	0.0	28.424805	1
CTAACGC	100	5.326575E-5	28.198832	3
TACATGG	6500	0.0	28.13383	2
ACGCAGA	4520	0.0	27.866104	7
GGTACCT	980	0.0	27.815176	8
ACCTAAG	780	0.0	27.121298	1
ACATGGG	6830	0.0	27.042803	3
CTTAGGT	700	0.0	26.85603	3
AGGTATA	705	0.0	26.665562	6
TATACCG	265	0.0	26.60267	4
GGGTACC	1030	0.0	26.008633	7