SRR6575851_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575851_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1551808
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2216	0.14280117127892109	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2074	0.1336505547077989	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1974	0.1272064585309523	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1914	0.12334000082484431	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1773	0.11425382521549057	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1631	0.10510320864436837	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1618	0.10426547614137832	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1590	0.10246112921186126	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1576	0.10155895574710273	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1575	0.10149451478533426	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2545	0.0	52.83116	1
TCAACGC	3125	0.0	41.20847	4
ATCAACG	3130	0.0	41.142643	3
CAACGCA	3210	0.0	40.11728	5
AACGCAG	3315	0.0	38.988373	6
GGTATCA	1050	0.0	37.16214	1
TATCAAC	3925	0.0	33.41769	2
TTAGGTA	705	0.0	33.33242	4
GTCTTAG	965	0.0	32.640694	1
ACCTAAG	955	0.0	31.99793	1
CTTAGGT	755	0.0	31.747473	3
ACGCAGA	4265	0.0	30.303974	7
CTAAGAC	1155	0.0	30.111727	3
GTACATG	6435	0.0	29.661245	1
TAAGACA	1245	0.0	29.444977	4
TACATGG	6585	0.0	28.771412	2
CCCTATA	165	2.9576768E-9	28.49233	2
TAGGTAT	755	0.0	28.012476	5
ACATGGG	6760	0.0	27.809889	3
AGGTATA	785	0.0	27.540646	6