SRR6575849_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575849_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1516374
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4857	0.3203035662705902	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	4799	0.31647865236412653	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	4039	0.2663590908311538	No Hit
GTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACG	2327	0.15345818379898363	No Hit
ACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTT	2238	0.14758891935630655	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1903	0.1254967442069041	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1873	0.12351834046218149	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	1873	0.12351834046218149	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGTTGCTGCTGTGTTTGGGACT	1714	0.11303280061515167	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2875	47.5802	1
GGTATCA	1030	42.900444	1
TCAACGC	3185	42.49798	4
ATCAACG	3235	41.69585	3
CAACGCA	3275	41.18659	5
AACGCAG	3440	39.074444	6
GGTAATC	470	34.99898	8
TATCAAC	3845	34.965588	2
ACGCAGA	4215	31.889936	7
AGGTATA	1330	31.803587	6
CTTAGGT	1320	31.688473	3
GTACATG	6240	31.489288	1
TTAGGTA	1340	31.215511	4
TAGGTAT	1370	30.875013	5
ACATGGG	6590	29.73965	3
TACATGG	6535	29.70815	2
GTCTTAG	1520	29.68922	1
TCTTAGG	1565	28.835535	2
ACCTAAG	1960	28.780367	1
GGTATAG	1460	28.64985	7