SRR6575839_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575839_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	933823
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	1968	0.21074657617128728	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1673	0.17915600708057094	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1200	0.12850400986054103	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1102	0.11800951572193018	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1033	0.11062053515494906	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1009	0.10805045495773824	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1001	0.10719376155866797	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	971	0.10398116131215444	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	970	0.10387407463727065	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1245	0.0	53.31366	1
GGTATCA	470	0.0	42.066868	1
TCAACGC	1620	0.0	39.741974	4
ATCAACG	1665	0.0	38.66787	3
CAACGCA	1715	0.0	37.540527	5
AACGCAG	1820	0.0	35.374725	6
GTACTAA	80	1.1458571E-5	35.306118	1
GTACATG	3115	0.0	33.24707	1
TACATGG	3265	0.0	31.954863	2
ACATGGG	3325	0.0	30.952547	3
CTTAGGT	505	0.0	30.709057	3
AGGTATA	490	0.0	29.731003	6
CTAGACG	95	3.75471E-5	29.680525	3
TAGGTAT	495	0.0	29.430687	5
TATCAAC	2225	0.0	29.359724	2
TTAGGTA	505	0.0	28.847902	4
ACGCAGA	2255	0.0	28.55078	7
GTCTTAG	555	0.0	27.990438	1
GTATAGT	530	0.0	27.5063	8
GGTATAG	530	0.0	27.487152	7