SRR6575827_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575827_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1560577
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	1953	0.12514601970937672	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1882	0.12059642042654736	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1858	0.11905852771122476	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1856	0.11893036998494788	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1803	0.11553419023861047	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1747	0.11194577390285772	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1714	0.10983117141928915	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1668	0.10688354371492083	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1637	0.10489709895762914	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1561	0.10002710535910757	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2690	55.74609	1
ATCAACG	3410	43.41589	3
TCAACGC	3405	43.341614	4
CAACGCA	3630	40.784626	5
AACGCAG	3710	40.15854	6
AGGTATA	440	36.317738	6
GGTATCA	1060	34.147655	1
TATCAAC	4480	33.157753	2
ACGCAGA	4580	32.427547	7
TAGGTAT	495	32.282433	5
GTACATG	6595	30.578663	1
TACATGG	6665	30.25751	2
CGCAGAG	4950	30.003672	8
ACATGGG	6890	29.05915	3
GGTAATC	340	29.029055	8
TTAGGTA	550	28.199654	4
GGTATAG	550	28.199654	7
CTTAGGT	555	27.945604	3
GCAGAGT	5395	27.61597	9
GTCTTAG	770	27.472477	1