SRR6575778_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575778_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	988931
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2328	0.23540570575702452	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1940	0.1961714214641871	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1573	0.15906064224905478	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1458	0.1474319239663839	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1377	0.139241261523807	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1238	0.12518568029518742	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	1107	0.11193905338188408	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1067	0.1078942818053029	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1033	0.10445622596520891	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	996	0.1007148122568713	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1455	52.98293	1
TCAACGC	2060	36.951084	4
ATCAACG	2090	36.42069	3
CAACGCA	2140	35.789303	5
AACGCAG	2200	34.813232	6
GTCTTAG	555	33.03138	1
ACCTAAG	830	32.281364	1
CTAAGAC	890	32.204697	3
GTACATG	4260	32.109863	1
TACATGG	4370	31.086477	2
CCTAAGA	910	30.993097	2
AGGTATA	460	30.643814	6
CTTAGGT	465	30.314312	3
TAAGACA	955	30.012754	4
TTAGGTA	470	29.99182	4
ACATGGG	4545	29.257145	3
TAGGTAT	500	28.19231	5
TATCAAC	2705	28.151585	2
ACGCAGA	2800	27.01763	7
GGTATAG	535	26.347954	7