SRR6575770_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575770_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	114134
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	243	0.21290763488531023	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	221	0.1936320465417842	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	180	0.15770935917430387	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	167	0.14631923878949304	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	147	0.12879597665901482	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	137	0.12003434559377574	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	133	0.1165296931676801	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	132	0.1156535300611562	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	128	0.11214887763506054	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	123	0.107768062102441	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	119	0.10426340967634536	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	115	0.10075875725024971	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAATACC	25	0.0052169575	56.419197	4
AACACTC	80	4.5802153E-9	46.9954	7
ATGGGGA	130	0.0	43.399387	5
TATTGTG	55	5.242562E-5	42.74182	5
ACACTCT	80	2.4345354E-7	41.12097	8
CACTCTA	85	3.9170845E-7	38.70209	9
ATGGGAG	215	0.0	37.175446	5
CATGGGG	415	0.0	36.253304	4
GTACATG	1095	0.0	35.76313	1
TACATGG	1095	0.0	35.637695	2
TTATTGT	80	1.1468592E-5	35.262	4
ACATGGG	1110	0.0	35.15611	3
GTATCAA	665	0.0	31.217821	1
ACACTGC	80	4.7569792E-4	29.372124	8
ATATCAA	65	0.0061210818	28.932924	3
ATGGGGG	180	2.3101165E-10	28.732	5
TTTGAAC	115	4.142006E-6	28.618437	3
GCTTTGA	150	3.502828E-8	28.308887	1
TGGGGCA	100	5.2699557E-5	28.209599	6
AACGCAG	735	0.0	28.145634	6