SRR6575770_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575770_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	114134
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	218	0.1910035572222125	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	208	0.18224192615697338	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	178	0.15595703296125607	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	170	0.1489477281090648	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	147	0.12879597665901482	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	146	0.12791981355249094	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	123	0.107768062102441	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	120	0.10513957278286926	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	117	0.10251108346329753	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	115	0.10075875725024971	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCTAC	25	0.005226021	56.394478	5
TAGGGGG	25	0.005226021	56.394478	5
GGGGGTT	40	5.657854E-4	46.9954	7
ATAGCTG	45	0.0010106029	41.773685	5
GGGTACC	95	2.0902007E-8	39.575073	7
ATGGGTA	100	3.284913E-8	37.596317	5
GGTACCT	100	3.284913E-8	37.596317	8
TGGGTAC	105	5.0478775E-8	35.80602	6
GTACTTG	55	0.002696484	34.208454	1
TGCCCGC	70	2.1628114E-4	33.597588	1
CATGGGT	155	4.0017767E-11	33.351574	4
GTGATAT	30	0.0041560517	31.330265	64-65
ATGGGAG	190	1.2732926E-11	29.681303	5
GTCCTAT	80	4.732595E-4	29.397888	1
CAAGACT	80	4.7569792E-4	29.372124	4
CCTATTC	80	4.7569792E-4	29.372124	3
GTATCAA	585	0.0	28.945612	1
GTACATG	1070	0.0	28.134054	1
TACATGG	1070	0.0	27.69446	2
TATTAAG	85	6.747434E-4	27.668602	2