SRR6575754_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575754_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	769398
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1227	0.15947533006324424	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	1226	0.15934535831910143	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1156	0.1502473362291038	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1063	0.13815996402382122	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	983	0.12776222449239535	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	937	0.12178352426182547	No Hit
GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG	912	0.11853423065825489	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	894	0.11619473926368408	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	887	0.1152849370546843	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	826	0.10735666066197208	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1040	0.0	55.140717	1
AGGTATA	170	0.0	38.69507	6
CATATAG	80	1.160371E-5	35.240154	3
GTCTTAG	255	0.0	35.023483	1
ATCAACG	1630	0.0	34.3033	3
TCAACGC	1660	0.0	33.68336	4
CTTAGGT	215	0.0	32.78154	3
GGTATCA	375	0.0	32.590275	1
CAACGCA	1775	0.0	31.765772	5
GTACATG	2960	0.0	31.442669	1
GTTAATA	60	0.0041578813	31.336802	1
ACCTAAG	455	0.0	30.99244	1
TACATGG	2990	0.0	30.812773	2
AACGCAG	1835	0.0	30.47105	6
ACATGGG	3105	0.0	29.357336	3
CTAAGAC	555	0.0	28.784752	3
TATCAAC	2010	0.0	28.764376	2
TAGGTAT	235	0.0	27.992178	5
TAAGACA	630	0.0	27.595465	4
TTAGGTA	245	0.0	26.84964	4