SRR6575753_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575753_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	823292
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	1244	0.1511007030312453	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1220	0.14818557692774859	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1115	0.13543190022495055	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1099	0.13348848282261944	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	1086	0.1319094561832254	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1025	0.12450017733683796	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	878	0.1066450299529207	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	875	0.10628063918998362	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	869	0.10555185766410946	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	859	0.1043372217876525	No Hit
GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG	855	0.10385136743706971	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1335	0.0	54.36706	1
ATCAACG	1875	0.0	38.355198	3
TCAACGC	1910	0.0	37.65235	4
CAACGCA	1965	0.0	36.598473	5
AACGCAG	2075	0.0	34.65831	6
TACATGG	3400	0.0	30.967287	2
GTACATG	3395	0.0	30.957188	1
GGTATCA	495	0.0	30.467804	1
TATCAAC	2455	0.0	29.676607	2
ACCTAAG	510	0.0	29.571697	1
ACGCAGA	2445	0.0	29.408136	7
ACATGGG	3540	0.0	29.344254	3
CATATAC	100	5.3186996E-5	28.202353	3
CTAAGAC	690	0.0	27.929865	3
CGCAGAG	2615	0.0	27.496325	8
CATGGGG	2135	0.0	27.079542	4
TAAGACA	740	0.0	26.042711	4
AGAGTAC	2460	0.0	25.694614	10-11
GTATACA	130	1.06430925E-5	25.377632	1
GCAGAGT	2835	0.0	25.362572	9