SRR6575744_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575744_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	865646
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3154	0.36435217167294714	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2110	0.2437485993119589	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1700	0.19638512740773945	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1118	0.12915210143638392	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1091	0.1260330435304963	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1070	0.12360710960369482	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	983	0.11355681190694579	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	961	0.11101535731696328	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	933	0.10778077874789463	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	893	0.10315995222065372	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	885	0.10223578691520552	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	3085	41.705368	1
GGTAATC	345	34.056465	8
AAGGGTA	360	32.641216	5
ATCAACG	4045	31.2581	3
TCAACGC	4035	31.219078	4
CAACGCA	4020	31.218643	5
TATCAAC	4090	31.144032	2
TAGGTAT	635	31.08883	5
AACGCAG	4150	30.693754	6
CTTAGGT	675	30.63922	3
AGGTATA	635	30.34862	6
TTAGGTA	670	30.16633	4
ACCTAAG	1120	28.613787	1
ATGGGAG	1165	27.838896	5
GTACATG	6175	27.246815	1
GTAATCA	435	27.010302	9
TCTTAGG	820	26.940945	2
ACATGGG	6320	26.402197	3
GTGCAAG	465	26.35147	1
GTCTTAG	805	26.345177	1