SRR6575684_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575684_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1402032
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2872	0.20484553847558404	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1925	0.13730071781528524	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1825	0.13016821299371198	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1788	0.12752918620972986	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1751	0.12489015942574778	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1522	0.108556723384345	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1483	0.10577504650393145	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1482	0.1057037214557157	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	1445	0.10306469467173358	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1417	0.10106759332169307	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1414	0.10085361817704588	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	685	56.2755	1
GTATCAA	2245	50.88456	1
TCAACGC	2735	40.38296	4
ATCAACG	2770	39.703037	3
CAACGCA	2825	39.42916	5
AACGCAG	2975	37.915073	6
GTACATG	4620	36.326397	1
TACATGG	4615	36.060158	2
ACATGGG	4700	35.299168	3
GTCTTAG	860	32.25148	1
TATCAAC	3460	31.657446	2
ACGCAGA	3690	30.568388	7
CTTAGGT	715	30.237051	3
TAGGTAT	725	29.819988	5
CATGGGG	2875	29.26192	4
CGCAGAG	3940	28.390196	8
TTAGGTA	730	28.3281	4
AGGTATA	775	26.076805	6
GGTATAG	780	25.909647	7
ACCTAAG	1165	25.82558	1